Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
3L92 Chain:A ((8-158))
-------AIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLK-NVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKLA----
General information:
TITO was launched using:
RESULT:
Template:
3L92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103542 for 1157 contacts (-89.5/contact) +
2D Compatibility (PS) -15958 + (NN) -4316 + (LL) 796
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -142270.0 ( -122.96 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3L92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L92-query.scw
PDB file :
Tito_Scwrl_3L92.pdb
: