Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
| 2NRG Chain:A ((50-57)) | ------------------------------------------------------------------------------------------------------------------------------------------------------VVGRMLPI------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1353 for 25 contacts (-54.1/contact) +
2D Compatibility (PS) -813 + (NN) 86 + (LL) 21256
1D Compatibility (HY) -1600 + (ID) 50
Total energy: 17526.0 ( 701.04 by residue)
QMean score : -0.276
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