Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSFIPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALI-----PTVILSIITRSLTITIISGIVIMATLRFFF
3RNZ Chain:A ((141-200))
------------------------------------------TFVCNHLFYGL-MDEISRHHPHIRGGFIHIPYIPEQTLQKSAPSLSLDHITKALKIAAVTA-----------
General information:
TITO was launched using:
RESULT:
Template:
3RNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26285 for 263 contacts (-99.9/contact) +
2D Compatibility (PS) -5631 + (NN) 1629 + (LL) 7144
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -27293.0 ( -103.78 by residue)
QMean score : -0.160
(partial model without unconserved sides chains):
PDB file :
Tito_3RNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RNZ-query.scw
PDB file :
Tito_Scwrl_3RNZ.pdb
: