Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
2ZXQ Chain:A ((849-939)) | -----------------------------------------------------------------------------NRSTGDASVTVTSGGKVLATN-STGKSIAKNYIKAYGHNTNSNTENGSSY-----------FQNMYVFFTAPENGDATVTLS---HKSTDGAHTYFDDVR------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35451 for 521 contacts (68.0/contact) +
2D Compatibility (PS) -8237 + (NN) 2604 + (LL) 12336
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: 38654.0 ( 74.19 by residue)
QMean score : -0.044
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