Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLCEAVGSADQNHKTFKTFLFFTRKKKQKNLPSATSAKGGFALVLV
2MTP Chain:B ((5-13))
--------------------FFKRNRPPL-----------------
General information:
TITO was launched using:
RESULT:
Template:
2MTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 664 for 20 contacts (33.2/contact) +
2D Compatibility (PS) -837 + (NN) 282 + (LL) 2476
1D Compatibility (HY) -800 + (ID) 150
Total energy: 1635.0 ( 81.75 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_2MTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MTP-query.scw
PDB file :
Tito_Scwrl_2MTP.pdb
: