Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKPLPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREVSRIFYSAIAPDC
3WU2 Chain:L ((22-32))
------LLILVLALLFS----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2323 for 35 contacts (-66.4/contact) +
2D Compatibility (PS) -1036 + (NN) 331 + (LL) 3548
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -2530.0 ( -72.29 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: