Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPN---------TSLKDQWWDERDFAVIDPDNNLISFFQQIKS
2ZHP Chain:A ((4-121))
LTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDDVTLFISAVQDQ-----------------VVPDNTLAWVWVRGLDELYAEWSE--VVSTNFRDASGPAMTEIGEQPWG-REFALRDPAGNCVHFVAE---
General information:
TITO was launched using:
RESULT:
Template:
2ZHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81771 for 761 contacts (-107.5/contact) +
2D Compatibility (PS) -11658 + (NN) -514 + (LL) 500
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -103793.0 ( -136.39 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHP-query.scw
PDB file :
Tito_Scwrl_2ZHP.pdb
: