Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAK-VKMVKEAGYELNV-WTVNKPARANQLANWGVDGIFTDNADKMVHLSQ
1ZCC Chain:A ((1-226))
MTKIVSHRGANRFAPENTFAAADLALQ-QGADYIELDVRESADGVLYVIHDETLDRTTNGTGPVGHMLSSEIDTLDAGGWFDDRFKGAIVPRLDAYLE-----------HLRGRAGVY-IELKYCDPAKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMM---TLDIAKSPSLVGAVHHASIIEITPAQMRRPGIIEASRKAGLEIMVYYGGDDMAVHREIATSDVDYINLDRPD-------
General information:
TITO was launched using:
RESULT:
Template:
1ZCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73969 for 1906 contacts (-38.8/contact) +
2D Compatibility (PS) -24498 + (NN) -12104 + (LL) 1976
1D Compatibility (HY) -10000 + (ID) 3150
Total energy: -121745.0 ( -63.87 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCC-query.scw
PDB file :
Tito_Scwrl_1ZCC.pdb
: