Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKTYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNILNKK
1P6R Chain:A ((3-76))
---KIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESD----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35350 for 500 contacts (-70.7/contact) +
2D Compatibility (PS) -7893 + (NN) -3050 + (LL) 3148
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -50295.0 ( -100.59 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_1P6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6R-query.scw
PDB file :
Tito_Scwrl_1P6R.pdb
: