Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMTGEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLNEDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3FOJ Chain:A ((20-89))
--------------------------------------------------NIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGG---------
General information:
TITO was launched using:
RESULT:
Template:
3FOJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39058 for 467 contacts (-83.6/contact) +
2D Compatibility (PS) -7809 + (NN) -3488 + (LL) 4596
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -50309.0 ( -107.73 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_3FOJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FOJ-query.scw
PDB file :
Tito_Scwrl_3FOJ.pdb
: