Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRDLTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
1QH5 Chain:A ((15-173)) | ---------------YLVIDDETKEAAIVDPVQP-QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLV-KLESGLKVY--GGDD----RIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGG--SEPPAVFTGDTLFVAGCGK--------FYEGTADEMCKAL---LEVLGRLPPDTRVYCGH--------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61483 for 1305 contacts (-47.1/contact) +
2D Compatibility (PS) -17400 + (NN) -8678 + (LL) 7216
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -92045.0 ( -70.53 by residue)
QMean score : 0.469
|
|
|