Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILA-SLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE |
2YZV Chain:A ((255-281)) | --------------------------------------------------------------------------------------VGAVYGQLAGAYYGLGAIPGRWLRALH------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9024 for 96 contacts (-94.0/contact) +
2D Compatibility (PS) -2542 + (NN) 1404 + (LL) 15684
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 3322.0 ( 34.60 by residue)
QMean score : -0.181
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