Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINRYITRGISEYL-SLDLQILLWNMVKERDNQP--HTDYLHIFKLQEDENILSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY
3MCA Chain:B ((212-294))
-----FVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSSTGHIHSLNE---IL------KDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWY---------
General information:
TITO was launched using:
RESULT:
Template:
3MCA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3554 for 383 contacts (9.3/contact) +
2D Compatibility (PS) -7839 + (NN) 2657 + (LL) 1944
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -7384.0 ( -19.28 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_3MCA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MCA-query.scw
PDB file :
Tito_Scwrl_3MCA.pdb
: