Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLKWVSSYNNERDAWFVLYPPSKASSCFTLIVDVALFSE
3ZG9 Chain:B ((410-425))
----------SGTKDQWFVGYTPNLV---------------
General information:
TITO was launched using:
RESULT:
Template:
3ZG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -475 for 37 contacts (-12.8/contact) +
2D Compatibility (PS) -1786 + (NN) -1925 + (LL) 2396
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -3290.0 ( -88.92 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_3ZG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZG9-query.scw
PDB file :
Tito_Scwrl_3ZG9.pdb
: