Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKYYTKEEVVISTLQTLASKFEDLDIDSHDNLNSFKARIGSTIDKLAKAPP--LNKYTFTELMIIISIIYFKNLYIGRLDKPSSRKKKGGNLIFEIVYNNQMLNSSTAKL
1ATT Chain:A ((193-241))
----------------------------------NKTEGRITDVI------PPQAINEFT---VLVLVNTIYFKGLWKSKFSPENTRKE-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1ATT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8086 for 134 contacts (-60.3/contact) +
2D Compatibility (PS) -4815 + (NN) -1944 + (LL) 4764
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -15631.0 ( -116.65 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_1ATT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ATT-query.scw
PDB file :
Tito_Scwrl_1ATT.pdb
: