Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLL--HQDGLITLPEHKYKTVAVKSTFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS |
| 4KA8 Chain:A ((504-575)) | --------------------------------------------------------------------------LTKQDEGLVAGIRN-IEWDAVE----LPSQFMENWCYHR------DTLMSIAKHYETGETLPEEVYKKLLAARTFRAGSFSLR----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14595 for 303 contacts (-48.2/contact) +
2D Compatibility (PS) -7130 + (NN) -522 + (LL) 11148
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -17449.0 ( -57.59 by residue)
QMean score : 0.125
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