Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIFAPIGLKLSKKVPNIIQKWIISILIVFAIVQLIL |
4IKZ Chain:A ((331-376)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11223 for 182 contacts (-61.7/contact) +
2D Compatibility (PS) -4547 + (NN) 1913 + (LL) 17656
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -2601.0 ( -14.29 by residue)
QMean score : -0.128
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