Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLSKYIEVADSEGLTITQATETHIHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMPSKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPDLLEKSVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKINNWAFNEIDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLYQSYDVYPSLDNKRVAFDLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLIGFDKVAGYRLPKSGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLLNENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK |
1QH5 Chain:A ((11-173)) | -------DNYM----YLVIDDETKEAAIVDPVQP-QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVK-LESGLKVYG-GDDRIG-----ALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGG--SEPPAVFTGDTLFVAGCGK--------FYEGTADEMCKALLEV---LGRLPPDTRVYCGH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63443 for 1349 contacts (-47.0/contact) +
2D Compatibility (PS) -18184 + (NN) -9543 + (LL) 14692
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -88928.0 ( -65.92 by residue)
QMean score : 0.507
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