Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
4BQB Chain:A ((142-180))
----------------------------YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8892 for 157 contacts (-56.6/contact) +
2D Compatibility (PS) -4115 + (NN) -702 + (LL) 4244
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -12565.0 ( -80.03 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_4BQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BQB-query.scw
PDB file :
Tito_Scwrl_4BQB.pdb
: