Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEAL---TAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISIM---------DVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
2I99 Chain:A ((1-306)) | -SRVPAFLSAAEVEEHL-RSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLG----VMPAYSAAEDALT-TKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFS-FKEVRIWNRTKENAEKFADTVQGE-----VRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVD-------SQEAALKESGDVL-----LSGAEIFAELGEVIKGVKPAH--CEKTTVFKSLGMAVEDTVAAKLIY--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141754 for 2587 contacts (-54.8/contact) +
2D Compatibility (PS) -31542 + (NN) -14673 + (LL) 2728
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -206791.0 ( -79.93 by residue)
QMean score : 0.470
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