Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQN-IADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK
3M8J Chain:A ((18-71))----------------------------------------------LRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHSRKDVCEKYQMN----------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 331 for 295 contacts (1.1/contact) +
2D Compatibility (PS) -5573 + (NN) -2364 + (LL) 10468
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 1362.0 ( 4.62 by residue)
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_3M8J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M8J-query.scw
PDB file : Tito_Scwrl_3M8J.pdb: