Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKD---EEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDEGNDMIESER |
4K38 Chain:A ((166-214)) | -----------------------------------------------VTSNTARHVNKVYKYFKEK---DFKFLQFINCLDPLYEEKGKYNYSLKPKDY--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5017 for 236 contacts (-21.3/contact) +
2D Compatibility (PS) -4841 + (NN) -1338 + (LL) 14580
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -1966.0 ( -8.33 by residue)
QMean score : 0.296
|
|
|