Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPEIIRLSSTIKACDQY--FNQILVHTGQNYDYTLNQIFFDDLELRQPDHYLEAVG--SNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLA-AVSAKRLKIPVFHMEAGNRCFDQ--NVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAH-RDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYK-MPVIYSTHPRSW-KKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK |
| 4FKZ Chain:A ((2-333)) | -KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQ-HRQMLDQVL-DAFHIK-PDFDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHP-VLDQVGED--KMILLTAHRRENLG--EPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGTDEENIYQ---LAKQL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126011 for 2779 contacts (-45.3/contact) +
2D Compatibility (PS) -34279 + (NN) -10620 + (LL) 3108
1D Compatibility (HY) -22000 + (ID) 4850
Total energy: -194652.0 ( -70.04 by residue)
QMean score : 0.435
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