Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF--GSDFNN------------VEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRTTIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIEKLLESKWWEKTPDKLKGFSVEYLNKKDT
3DHO Chain:A ((26-182))
---------------------------------------------KLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWW--------------------
General information:
TITO was launched using:
RESULT:
Template:
3DHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64573 for 977 contacts (-66.1/contact) +
2D Compatibility (PS) -15728 + (NN) -10209 + (LL) 4036
1D Compatibility (HY) -12800 + (ID) 2850
Total energy: -102124.0 ( -104.53 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3DHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DHO-query.scw
PDB file :
Tito_Scwrl_3DHO.pdb
: