Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVSTTPEAS----DVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-CLVHCPERVLPGKILEELVHNNRIIGGV-----TKACIEAGKYVYRTFVQG--EMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIH--QPGPGVGGHCLAVDPYFIIAKDPENAKLIQTGREINNSMPAYVVDTTKQIIKA----------LSGNKVTVFGLTYKGDVDDIRESPAFD-IYELLNQEPDIEVCAYDPHVE--------LDFVEH-----------DMSHAVKDASLVLILSDHSEFKNLSDSHFDKM-KHKVIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 2Y0D Chain:A ((9-441)) | MNLTIIGSGKVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDE----SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSS------VNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSR--GARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190627 for 3116 contacts (-61.2/contact) +
2D Compatibility (PS) -41050 + (NN) -4461 + (LL) 1716
1D Compatibility (HY) -19200 + (ID) 6150
Total energy: -259772.0 ( -83.37 by residue)
QMean score : 0.540
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