Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIP--------------EEDDETKYHYFTKLLNLLKYEQVTYLIDANPSILTPSF------------Y-EHLRQ-YD-AQFMIRIDHSTSIEAIEAIMAQGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
| 2DH2 Chain:A ((39-147)) | -------------KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFG-SKEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDIENL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37189 for 453 contacts (-82.1/contact) +
2D Compatibility (PS) -8387 + (NN) -6919 + (LL) 18432
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -36413.0 ( -80.38 by residue)
QMean score : 0.363
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