Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYPFNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK |
2XRF Chain:A ((198-266)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEM----ESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQI----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29684 for 338 contacts (-87.8/contact) +
2D Compatibility (PS) -6816 + (NN) 2562 + (LL) 23904
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -15184.0 ( -44.92 by residue)
QMean score : -0.004
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