Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLHKKIAWTGIKGSAITTFITALYNGSSVWNALAVAGIAFGGGAGTAVAALGRATVMRFIKRWGVRKTAAW
3CSY Chain:I ((66-121))
-----------------------------------------------------------SATKRWGFRSGV--
General information:
TITO was launched using:
RESULT:
Template:
3CSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34 for 28 contacts (-1.2/contact) +
2D Compatibility (PS) -1143 + (NN) 1138 + (LL) 4700
1D Compatibility (HY) 0 + (ID) 250
Total energy: 4411.0 ( 157.54 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3CSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CSY-query.scw
PDB file :
Tito_Scwrl_3CSY.pdb
: