Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNDLLVMSVVYILTSVIMFYINGLSKQFFTYVVGFPIIYFGYICLVNLIKKRSRNN
2FPN Chain:A ((204-214))
-------------------------------TVTVGTPIVTT----------------
General information:
TITO was launched using:
RESULT:
Template:
2FPN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -775 for 24 contacts (-32.3/contact) +
2D Compatibility (PS) -1183 + (NN) -628 + (LL) 4148
1D Compatibility (HY) 0 + (ID) 250
Total energy: 1312.0 ( 54.67 by residue)
QMean score : -0.331
(partial model without unconserved sides chains):
PDB file :
Tito_2FPN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPN-query.scw
PDB file :
Tito_Scwrl_2FPN.pdb
: