Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
4L9V Chain:A ((2-139))
-EFTYSYLFRMISHEMKQKADQKLEQLDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
General information:
TITO was launched using:
RESULT:
Template:
4L9V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43190 for 828 contacts (-52.2/contact) +
2D Compatibility (PS) -14680 + (NN) -6147 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6850
Total energy: -88259.0 ( -106.59 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4L9V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L9V-query.scw
PDB file :
Tito_Scwrl_4L9V.pdb
: