Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVFIIEEDEA
2LYQ Chain:A ((4-61))
--NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF-------
General information:
TITO was launched using:
RESULT:
Template:
2LYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24591 for 406 contacts (-60.6/contact) +
2D Compatibility (PS) -6196 + (NN) -1014 + (LL) 1096
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -37605.0 ( -92.62 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2LYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYQ-query.scw
PDB file :
Tito_Scwrl_2LYQ.pdb
: