Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
3M05 Chain:A ((7-114))
-KLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHTREEFMTP-------------YPIKVQVGGATVLVLPVDQFERF
General information:
TITO was launched using:
RESULT:
Template:
3M05.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52442 for 613 contacts (-85.5/contact) +
2D Compatibility (PS) -10415 + (NN) -5248 + (LL) 356
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -83549.0 ( -136.30 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3M05.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M05-query.scw
PDB file :
Tito_Scwrl_3M05.pdb
: