Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEWSQIFHDITTK-----HDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPH--LQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
1FLZ Chain:A ((6-220))
------WHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWM----
General information:
TITO was launched using:
RESULT:
Template:
1FLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115005 for 1688 contacts (-68.1/contact) +
2D Compatibility (PS) -21924 + (NN) -7372 + (LL) 1088
1D Compatibility (HY) -20800 + (ID) 5300
Total energy: -169313.0 ( -100.30 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1FLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FLZ-query.scw
PDB file :
Tito_Scwrl_1FLZ.pdb
: