Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
3WQJ Chain:A ((27-71))
-----------TLLMLIGTFYFIARGWGVTDKEAREYYAITILVPGIASAAYLAMF------
General information:
TITO was launched using:
RESULT:
Template:
3WQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34066 for 245 contacts (-139.0/contact) +
2D Compatibility (PS) -4714 + (NN) -2606 + (LL) 2184
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -41552.0 ( -169.60 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_3WQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WQJ-query.scw
PDB file :
Tito_Scwrl_3WQJ.pdb
: