Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQL-------SIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
3L2I Chain:A ((34-272))
-----VVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVK---APGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
3L2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134734 for 1807 contacts (-74.6/contact) +
2D Compatibility (PS) -24369 + (NN) -11427 + (LL) 1040
1D Compatibility (HY) -12400 + (ID) 3950
Total energy: -185840.0 ( -102.84 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3L2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L2I-query.scw
PDB file :
Tito_Scwrl_3L2I.pdb
: