Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVLYPVE--SVLKKDKVNFVQAEVTKIDRDAKKV--------------ETNQGIYD-------FDILVVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDD----------NDLSILVGGAGFTGVEFLGELTDRIPELCSKY-GVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNEKGFVVEVDGE-----KQQLNAGTSVWAAGVRGSKLMEESFEGV------KRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKN-------------IKRILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF |
| 4G74 Chain:A ((41-448)) | ---DKPNVLILGSGWGAISFL----KHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRR-------TFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRG-LAVNDFLQVKGSNNIFAIGD-NAF--AG----LPPTAQVAHQEAEYLAKNFDKMAQIPNFQDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATI------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189834 for 2817 contacts (-67.4/contact) +
2D Compatibility (PS) -36791 + (NN) -8145 + (LL) 4332
1D Compatibility (HY) -24400 + (ID) 5800
Total energy: -260638.0 ( -92.52 by residue)
QMean score : 0.504
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