Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSI---DNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL |
1XAW Chain:A ((445-495)) | ---SLQSVLDEINKELSRLDKELDDYRE--------------ESEEYMAAADEYNRLKQVKGSADYKS------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5439 for 228 contacts (-23.9/contact) +
2D Compatibility (PS) -5259 + (NN) -3487 + (LL) 9452
1D Compatibility (HY) 800 + (ID) 350
Total energy: -4283.0 ( -18.79 by residue)
QMean score : 0.428
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