Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQISNINKSFNK-----RCVLKNISFDIEQGKCIALIGKNGAGKSTLIDILIGNVNANSGEI-FDKDKLLQSENR---SIMFQKTMFP-DQL---KVI-EIINLYQSFYENPLPLEEIIELTKFDSSQLNQFVNK----LSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNRTILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQSQITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITSNVNDTILYLQQLHINLDDIEIQKVSIVDSYFNNKKQRGSNYDTKLLENRI |
| 2YZ2 Chain:A ((3-221)) | -IEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIRRNIGIAFQ---YPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGT---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131267 for 1592 contacts (-82.5/contact) +
2D Compatibility (PS) -21621 + (NN) -5896 + (LL) 6932
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -169652.0 ( -106.57 by residue)
QMean score : 0.567
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