Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFK-----LPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAA---RKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQK-------GEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSL-RTVDYVIVR-NSIFNGDRD |
| 2A7R Chain:A ((28-356)) | ---LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGY--PQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135227 for 2830 contacts (-47.8/contact) +
2D Compatibility (PS) -33902 + (NN) -9310 + (LL) 132
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -201457.0 ( -71.19 by residue)
QMean score : 0.483
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