Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLFIPYIMG---NKDLIENATLLSENGADIIEIGVPFSDPVADGPVIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDTGVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTMNATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVAD-IKEVADGIVIGSEIVKRFKSNTREEIIRYLQSIQQTLNN
2DZT Chain:A ((7-233))
----LIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVAGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGRE---------------
General information:
TITO was launched using:
RESULT:
Template:
2DZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186949 for 1821 contacts (-102.7/contact) +
2D Compatibility (PS) -24175 + (NN) -12423 + (LL) 1904
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -237293.0 ( -130.31 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_2DZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZT-query.scw
PDB file :
Tito_Scwrl_2DZT.pdb
: