Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDERVLDVVIKGHE--RLYEVMKEKD-EIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQKIKVLLAQSLFGEPDVLLLDEPTNGLDIP---AISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNMNLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVNDGLKSF----KGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK |
| 3J15 Chain:B ((102-536)) | -------------------------DGMVVGIVGPNGTGKTTAVKILAGQL--------------IPNLCEDNDSWDN---VIRAFRGNELQNYFERLKNGEIRPVVKPQYVD---LLPKAVKGKVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYL-SDVIHVVYGEPGVY-----------GIFSKPKGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSER--------VDVERETLVEYPRLV----KDYGSFKLEVE------PGEIRKGEVIGIVGPNG---------IGKTTFVKMLAGVEEPTEGKVEWDLT--VAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVED----LSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51118 for 3341 contacts (-15.3/contact) +
2D Compatibility (PS) -44861 + (NN) -17615 + (LL) 7168
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -136876.0 ( -40.97 by residue)
QMean score : 0.341
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