Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLR--------------------------LIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQG-------N----------------------------------SK---GILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
| 3BB0 Chain:A ((340-513)) | ----------------------------------------------------------------------------------------VACTDAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHFDSAWELMFENAISRIFLGVHWRFDAAAARDILIPTTT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40921 for 645 contacts (-63.4/contact) +
2D Compatibility (PS) -10696 + (NN) 253 + (LL) 10652
1D Compatibility (HY) 1600 + (ID) 1200
Total energy: -40312.0 ( -62.50 by residue)
QMean score : 0.059
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