Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
4RKS Chain:A ((45-101))
-----VTRTPLHTSAGIAYSDSCGSIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYS---------------------
General information:
TITO was launched using:
RESULT:
Template:
4RKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 261 for 211 contacts (1.2/contact) +
2D Compatibility (PS) -5817 + (NN) 608 + (LL) 2316
1D Compatibility (HY) -400 + (ID) 700
Total energy: -3732.0 ( -17.69 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_4RKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RKS-query.scw
PDB file :
Tito_Scwrl_4RKS.pdb
: