Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWLVIMIIHNKARFLCCSKLLEKFYSFLVTRIKKRGIFFIK
3GQQ Chain:A ((181-189))
-----LVMHNKADY---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 16 contacts (0.0/contact) +
2D Compatibility (PS) -787 + (NN) 1564 + (LL) 3624
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 2601.0 ( 162.56 by residue)
QMean score : -0.834
(partial model without unconserved sides chains):
PDB file :
Tito_3GQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GQQ-query.scw
PDB file :
Tito_Scwrl_3GQQ.pdb
: