Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKI--EQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
4JYX Chain:A ((39-336)) | ------------VNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAAR-ALNIQT-EQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYAS-------NMGDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETGNGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGL--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116249 for 2392 contacts (-48.6/contact) +
2D Compatibility (PS) -31102 + (NN) -15341 + (LL) 1712
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -183430.0 ( -76.68 by residue)
QMean score : 0.484
|
|
|