Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEV----RKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKP-SSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
2FR6 Chain:A ((10-143))
--VEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYK--DFRAIAISSDLQEEFISPCGACRQVMREF-GTDWAVYMTKPDGTFVVRTVQELLPASFGPEDLQ
General information:
TITO was launched using:
RESULT:
Template:
2FR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37979 for 954 contacts (-39.8/contact) +
2D Compatibility (PS) -14392 + (NN) -9063 + (LL) -76
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -76760.0 ( -80.46 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_2FR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR6-query.scw
PDB file :
Tito_Scwrl_2FR6.pdb
: