Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
3WZ3 Chain:A ((42-71))
------------DEGFAGYVNALQASNILETIKKEKMNLTAT----------------
General information:
TITO was launched using:
RESULT:
Template:
3WZ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2758 for 113 contacts (24.4/contact) +
2D Compatibility (PS) -3142 + (NN) -1878 + (LL) 2360
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -2002.0 ( -17.72 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_3WZ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WZ3-query.scw
PDB file :
Tito_Scwrl_3WZ3.pdb
: