Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAET--LSEATRSELVQVIGSMIV---IYRESKEN-KEIELP
1USY Chain:A ((126-198))
-------------------IVEIGHTGVYEDLLKEIPKDLHEKVL--------NLIDTKNLAEIEFLSHMKKIDLSRV--EKIIEDSIYRRSPEHLKTMDLP
General information:
TITO was launched using:
RESULT:
Template:
1USY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7087 for 344 contacts (20.6/contact) +
2D Compatibility (PS) -6647 + (NN) -456 + (LL) 2168
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -6448.0 ( -18.74 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1USY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1USY-query.scw
PDB file :
Tito_Scwrl_1USY.pdb
: