Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPA------QKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
4HF0 Chain:A ((1-129))
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVD-------------AQGGDKALTHALWRDLSDRLTGFLNNITLGEL-----------------
General information:
TITO was launched using:
RESULT:
Template:
4HF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72133 for 776 contacts (-93.0/contact) +
2D Compatibility (PS) -11507 + (NN) -2735 + (LL) 1752
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -97123.0 ( -125.16 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4HF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HF0-query.scw
PDB file :
Tito_Scwrl_4HF0.pdb
: