Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIK---------PNVP-VIYAVKNEDALKYVRERAIEQHAKPIELDREIVVVSQNDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIESVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQ--YHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVEFIKNYQG----DTLVITGSLYFISEVKSKLDFEAL |
| 3QCZ Chain:A ((20-435)) | LCYLEHLH------S---ELGLERVKQVAERLDLLKPAPKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSE------AEHSHSFAQIEAGRGDISL-TYFEFGTLSALQLFKQAK-LDVVILEVGLGGRLDATNIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVFRGGKPAVVGEPDMPQSIADVAAELGAQLYRRDVAWKFSQ--------------NGWHWQCGERQLTGLPVPNV---PLANAATAL-AVLHYSE---LPLSDEAIRQGLQAASLPGRFQVVSEQPLLILDVAHNPHAARYLVNRLAQVI---QGKVRAVVGMLSDKDIAGTLACLSERVDEWYCAPLEGPRGASAGQLAEHLVSAR-QFSDVETAWRQAMQDADTQDVVIVCGSFHTVAHVMAAL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159737 for 3254 contacts (-49.1/contact) +
2D Compatibility (PS) -40419 + (NN) -12643 + (LL) 3732
1D Compatibility (HY) -22000 + (ID) 4950
Total energy: -236017.0 ( -72.53 by residue)
QMean score : 0.484
|
|
|